Identified primary metabolite regions

FN545816.1 (Clostridioides difficile R20291 (Clostridium difficile R20291))
Region Type Class From To Most similar known cluster Similarity
Region 1 porA SCFA 149,443 166,853 porA C. sporogenes POR 80%
Region 2 p-cresol Aromatic 187,573 211,485 P-cresol synthesis C. difficille PCRE 100%
Region 3 Leucine_reduction SCFA 427,493 456,629 Leucine reductive branch C. difficile LEU 100%
Region 4 Acetyl-CoA_pathway SCFA 789,876 828,298 Acetyl-CoA pathway C. beijerinckii Acetate 100%
Region 5 Pyruvate2acetate-formate SCFA 842,068 865,193 Pyruvate to acetate-formate E. coli PFL_acetate 100%
Region 6 Arginine2putrescine,Putrescine2spermidine Aliphatic_amine 987,405 1,011,129 Arginine degradation C. sticklandii ARG 44%
Region 7 acetate2butyrate SCFA 1,115,678 1,141,705 Acetate to butyrate C. sporogenes BUT 100%
Region 8 Rnf_complex E-MGC 1,182,232 1,207,321 Rnf complex C. sporogenes RNF 100%
Region 9 Others_HGD_unassigned Putative 1,922,516 1,966,449 Glycine reductase C. sticklandii GLY 33%
Region 10 EUT_pathway SCFA-other 2,131,835 2,167,929 Ethanolamine degradation S. typhimurium EUT 52%
Region 11 OD_lactate_related,OD_unknown,OD_aldehydes_related Putative 2,447,182 2,489,683 porA C. sporogenes POR 60%
Region 12 aminobutyrate2Butyrate,Glycine_reductase SCFA 2,605,638 2,644,337 Glycine reductase C. sticklandii GLY 83%
Region 13 porA SCFA 2,708,383 2,730,959 porA C. sporogenes POR 60%
Region 14 OD_fatty_acids,PFOR_II_pathway SCFA 2,996,063 3,026,202 PFOR II pathway B. thetaiotaomicron PFORII 100%
Region 15 Flavoenzyme_sugar_catabolism Putative 3,499,232 3,550,027
Region 16 proline2aminovalerate npAA 3,689,105 3,714,960 Proline to aminovalerate C. sticklandii AMI 75%
Region 17 Hydroxy-L-proline2proline Other 3,742,178 3,764,547 Hydroxy-L-proline2proline C. difficile PRO 100%