Identified primary metabolite regions

NZ_CP115183.1 (Clostridioides difficile R20291 (Clostridium difficile R20291))
Region Type Class From To Most similar known cluster Similarity
Region 1 porA SCFA 162,814 180,224 porA C. sporogenes POR 80%
Region 2 p-cresol Aromatic 200,944 224,856 P-cresol synthesis C. difficille PCRE 100%
Region 3 Leucine_reduction SCFA 440,865 470,001 Leucine reductive branch C. difficile LEU 100%
Region 4 Acetyl-CoA_pathway SCFA 803,326 841,748 Acetyl-CoA pathway C. beijerinckii Acetate 100%
Region 5 Pyruvate2acetate-formate SCFA 855,667 878,792 Pyruvate to acetate-formate E. coli PFL_acetate 100%
Region 6 Arginine2putrescine,Putrescine2spermidine Aliphatic_amine 1,001,004 1,024,728 Arginine degradation C. sticklandii ARG 44%
Region 7 acetate2butyrate SCFA 1,129,277 1,155,304 Acetate to butyrate C. sporogenes BUT 100%
Region 8 Rnf_complex E-MGC 1,195,831 1,220,920 Rnf complex C. sporogenes RNF 100%
Region 9 Others_HGD_unassigned Putative 1,936,114 1,980,047 Glycine reductase C. sticklandii GLY 33%
Region 10 EUT_pathway SCFA-other 2,145,433 2,181,527 Ethanolamine degradation S. typhimurium EUT 52%
Region 11 uric_acid2SCFA,xanthine_dehydrogenase Other 2,310,023 2,374,454 Uric acid to SCFA C. sporogenes UC 71%
Region 12 OD_lactate_related,OD_unknown,OD_aldehydes_related,porA,Anaerobic_sulfite_redutase SF 2,460,782 2,525,404 Anaerobic sulfite to H2S F. plautii H2S 100%
Region 13 aminobutyrate2Butyrate,Glycine_reductase SCFA 2,619,237 2,657,936 Glycine reductase C. sticklandii GLY 83%
Region 14 Phenylpyruvate_ferredoxin_oxidoreductase Other 2,660,199 2,682,563 Phenylpyruvate to phenylacetylCoA M .marburgensis PHE 100%
Region 15 porA SCFA 2,721,982 2,744,558 porA C. sporogenes POR 60%
Region 16 OD_fatty_acids,PFOR_II_pathway SCFA 3,009,661 3,039,800 PFOR II pathway B. thetaiotaomicron PFORII 100%
Region 17 Bilirubin_reductase Other 3,213,099 3,236,695 Bilirubin to urobilinogen C. difficile BI 100%
Region 18 Flavoenzyme_sugar_catabolism Putative 3,512,779 3,563,574
Region 19 uric_acid2SCFA SCFA 3,617,425 3,658,195 Uric acid to SCFA C. sporogenes UC 85%
Region 20 proline2aminovalerate npAA 3,702,652 3,728,507 Proline to aminovalerate C. sticklandii AMI 75%
Region 21 Hydroxy-L-proline2proline Other 3,755,725 3,778,094 Hydroxy-L-proline2proline C. difficile PRO 100%